Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs80315013 chr10:43173099 A/C 6.87E-5 287 25.58 27.75 11.43 KM Plot
KIRP rs80330300 chr21:44259920 G/C 0.000171 286 25.53 43.53 13.07 KM Plot
KIRP rs80343944 chr10:43184703 T/A 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs8035023 chr15:78135376 T/G 6.08E-5 283 26.37 25.5 14.25 KM Plot
KIRP rs8036979 chr15:52947995 A/T 0.00014 289 27.47 21.97 12.1 KM Plot
KIRP rs8048897 chr16:88744470 T/G 5.48E-9 279 13 21.48 26.4 KM Plot
KIRP rs8049890 chr16:8710967 G/A 2.61E-5 284 5.72 32.93 25.53 KM Plot
KIRP rs8051505 chr16:8711920 G/T 5.97E-5 287 5.72 34.3 25.53 KM Plot
KIRP rs8052173 chr16:8711942 T/C 5.97E-5 287 5.72 34.3 25.53 KM Plot
KIRP rs8052189 chr16:8711984 T/C 5.97E-5 287 5.72 34.3 25.53 KM Plot
KIRP rs8055693 chr16:8712015 G/T 5.97E-5 287 5.72 34.3 25.53 KM Plot
KIRP rs8057713 chr16:8715509 C/T 5.14E-5 289 5.72 32.93 25.57 KM Plot
KIRP rs8059132 chr16:8715072 A/C 5.14E-5 289 5.72 32.93 25.57 KM Plot
KIRP rs8059304 chr16:1006882 C/T 5.03E-7 283 26.7 22.68 10.97 KM Plot
KIRP rs8060579 chr16:88751667 G/C 3.2E-9 283 13 22.23 26.57 KM Plot